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This paper presents a cyber physical system implementation of an improved distributed secondary control (IDSC) scheme of islanded dc microgrid (DCMG). The IDSC scheme mitigates the hidden issues of primary control with included droop technique for the distributed generation unit (DGU) in a DCMG by providing the adjustable voltage compensation, improves voltage regulation and enhances the current sharing of all DGUs. The voltage compensation of IDSC is the resultant of two voltage components, i.e., average distributed integral voltage controller and average current controller. The dynamic consensus algorithm is used to obtain the global average values in the for distributed secondary controlusing relatively low bandwidth communication. The impact of communication time delay on the stability in IDSC based DCMG with two DGUs is presented. The performance of IDSC scheme is validated on a microgrid scenario, which includes parallel connection of four DGUs and common load. The real-time cyber physical system of DCMG is implemented on OP AL-RT test platform that combines the device layer on FPGA, control and cyber layers on CPU of OP5700 by using eFPGASim and RT-LAB.